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Obsoletion notice: GO:0044149 cellular biosynthetic process, GO:0045226 extracellular polysaccharide biosynthetic process, GO:0031327 negative regulation of cellular biosynthetic process, GO:0031328 positive regulation of cellular biosynthetic process #860

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edwong57 opened this issue Oct 7, 2024 · 0 comments

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@edwong57
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edwong57 commented Oct 7, 2024

Dear all,

The proposal has been made to obsolete
GO:0044149 cellular biosynthetic process
GO:0045226 extracellular polysaccharide biosynthetic process
GO:0031327 negative regulation of cellular biosynthetic process
GO:0031328 positive regulation of cellular biosynthetic process
(keep one, remove others):

  • The reason for obsoletion is that these terms are now redundant with:
    GO:0009058 | biosynthetic process
    GO:0005976 | polysaccharide biosynthetic process
    GO:0009890 | neg regulation of biosynthetic process
    GO:0009891 | pos regulation of biosynthetic process

Related to clean up of cellular process terms - geneontology/go-ontology#28908

Annotations:
There are 56 experimental annotations to this term by:
ARUK-UCL 5
BHF-UCL 1
MGI 3
PseudoCAP 42
EcoCyc 6
UniProt 21

There are 5 InterPro2GO/UniRule/UniProtKW mappings to this term.

Annotations can be viewed here: geneontology/go-annotation#5469.

These terms are being replaced by the corresponding term without 'cellular' in the name:
GO:0009058 | biosynthetic process
GO:0005976 | polysaccharide biosynthetic process
GO:0009890 | neg regulation of biosynthetic process
GO:0009891 | pos regulation of biosynthetic process

Any comments can be added to the issue: geneontology/go-ontology#29022.

Unless objections are received by Oct 14, 2024, we will assume that you agree to this change.

Thanks,

The GO-Ontology Editors

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