Code for Walker, Saunders, Rai et al., (2021).
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Updated
Feb 2, 2022 - Roff
Code for Walker, Saunders, Rai et al., (2021).
Penalized regression for multiple types of many features with missing data using expectation-maximization (EM) algorithm.
Hidden Markov Random Field Model - Inferring Gene-Disease Association by an Integrative Analysis of eQTL GWAS and Protein-Protein Interaction data
Repository for the MetaBridge Shiny app.
MATLAB and R Code for sparse GCA
A Python package for metabolite enrichment analysis.
The statistical utility for RBP functions (SURF)
🕸 Network-based multi-omic integration of metabolomics data.
Tool for integrative gene-based association analysis using GWAS summary stats
MONTI is a tool for analyzing large multi-omics cancer cohort data in association with clinical featuers
Bi-order integration (in silico multi-omics data) of single cell RNA sequencing, single cell ATAC sequencing, spacial transcriptomics and CyTOF data
An unsupervised approach for the integrative analysis of single-cell multi-omics data
A Decomposition-based Canonical Correlation Analysis for High-dimensional Datasets (JASA-20 paper)
Colocalization analysis of genetic association signals
Natural language processing of Gene Expression Omnibus data
TCGAbiolinks
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