Automated and friendly RNA-seq analysis (deprecated)
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Updated
May 21, 2019 - Python
Automated and friendly RNA-seq analysis (deprecated)
kallisto indexing and tag extraction
Transform, query, and merge tabular files with the expressionable command-line tool. This tool is used primarily for gene-expression data.
Estimate fastq-formatted read abundace in RNA-Seq analysis with Kallisto
Iso-seq and Kallisto integration
A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing
A Snakemake workflow for differential expression analysis of RNA-seq data with Kallisto and Sleuth.
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