Perl libraries for handling rRNA annotated multiple sequence alignments, and more
-
Updated
Feb 16, 2018 - Perl
Perl libraries for handling rRNA annotated multiple sequence alignments, and more
Tools for metagenomic assembly processing.
Repository for V-Xtractor an open-source, high-throughput software tool to identify and extract hypervariable regions of small subunit (16S/18S) ribosomal RNA gene sequences
OTUStalker is a small software tool designed to be compatible with QIIME (v1.8.0). Its purpose is to retrieve data pertinent to a single taxonomic group, from a larger (presumably mixed) data set, therefore allowing the user to concentrate their efforts on the specific taxa of interest. In effect, OTUStalker is taking the place of a targeted PCR…
A tool to identify and extract the commonly used ITS folding motifs from a 16s-23s rRNA sequence.
Ribo-seq focused Oligo Design pipeline for experiment-specific Depletion of Ribosomal RNAs
Mapping-Assisted Targeted-Assembly for Metagenomics
Protist Ribosomal Reference database (PR2) - SSU rRNA gene database
🧪 New pipeline for detecting pseudouridine modification on RNA (BID-seq, etc)
PipeCraft2 is a Graphical User Interface (GUI) for various metabarcoding pipelines
Amplicon sequencing analysis workflow using DADA2 and QIIME2
Add a description, image, and links to the rrna topic page so that developers can more easily learn about it.
To associate your repository with the rrna topic, visit your repo's landing page and select "manage topics."