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Feb 24, 2017 - Python
single-cell-rna-seq
Here are 407 public repositories matching this topic...
Package for analyzing batch effects in single cell RNA sequencing (scRNA-seq) analysis and predicting their impact on downstream analysis.
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Jul 31, 2017 - R
Analyzing batch effects in single cell RNA sequencing (scRNA-seq) analysis and predicting their impact on downstream analysis.
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Aug 9, 2017 - R
The R package to estimate neuron maturity index, a series of scores representing maturity states of homogeneous neuronal samples (e.g. single neurons), given the gene expression information by RNA-sequencing (in FPKM).
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Aug 20, 2017 - R
Data and analysis for the Splatter paper
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Dec 4, 2017 - R
Preliminary version of a single-cell filtering tool to remove features with technical variability greater than biological. The definitive version of this package can be found in: https://github.com/gdevailly/scFeatureFilter
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Dec 6, 2017 - R
💬 Talk comparing two recent methods for differential expression analysis with single-cell RNA-seq data
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Apr 11, 2018 - TeX
CONICS: COpy-Number analysis In single-Cell RNA-Sequencing
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Apr 23, 2018 - R
Workshop for BioC 2018
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May 10, 2018
An object oriented python library for topological data analysis of high-throughput single-cell RNA-seq data
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Jul 12, 2018 - Python
GCA: Gene Correlation Analysis for Single-cell RNA-seq data
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Aug 14, 2018 - R
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Aug 17, 2018 - Perl
A summer workshop on single-cell (gen)omics and data analysis
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Aug 17, 2018 - HTML
Single cell trajectory detection
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Aug 21, 2018 - Jupyter Notebook
Tutorial for the analysis of scRNA-seq data in R
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Aug 28, 2018 - TeX
Code and resources related to the olfactory regeneration project
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Aug 30, 2018 - R
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Sep 10, 2018 - R
Dynamic models for single-cell RNA-seq time series.
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Sep 24, 2018 - Jupyter Notebook
Generate the UMI count matrix from CEL-Seq2 sequencing data
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Oct 12, 2018 - Python
Examples of single-cell RNA-Seq analysis (slight modifications of existing tutorials by others to teach myself).
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Oct 15, 2018 - R
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