Added nucleotide color options to the preferences menu #1354
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Added the ability to set nucleotide color options to the preferences menu, under General > Nucleotide Colors.
Also modified SequenceRenderer to update nucleotide colors from preferences when a new SequenceRenderer is instantiated. This way, the colors will be updated when reloading the session or loading a new session. I'm not sure if this is the ideal solution to the problem of updating the colors without having to restart, so I'd be very happy to change it if there is a better way.