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docum #750

Workflow file for this run

name: CI
on: [push, pull_request, release]
jobs:
tests_and_coverage:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
python-version: [3.9]
toolchain:
- {compiler: gcc, version: 10}
- {compiler: gcc, version: 11}
- {compiler: gcc, version: 12}
- {compiler: gcc, version: 13}
- {compiler: intel, version: '2024.1'}
- {compiler: intel, version: '2023.2'}
steps:
- name: Checkout code
uses: actions/checkout@v2
with:
submodules: false
- name: Setup Fortran Compiler
uses: fortran-lang/setup-fortran@v1
id: setup-fortran
with:
compiler: ${{ matrix.toolchain.compiler }}
version: ${{ matrix.toolchain.version }}
- name: Install Python
uses: actions/setup-python@v1 # Use pip to install latest CMake, & FORD/Jin2For, etc.
with:
python-version: ${{ matrix.python-version }}
- name: Setup Graphviz
uses: ts-graphviz/setup-graphviz@v1
- name: Setup Fortran Package Manager
uses: fortran-lang/setup-fpm@v4
with:
github-token: ${{ secrets.GITHUB_TOKEN }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install ford numpy matplotlib gcovr numpy scipy
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi
sudo apt-get install libnlopt-dev
- name: Run tests without coverage
if: ${{ env.FC != 'gfortran' }}
run: |
fpm test --profile release --flag "-g" --compiler ${{ env.FC }} --c-compiler gcc
- name: Run tests with coverage
if: ${{ env.FC == 'gfortran' }}
run: |
fpm test --profile release --flag "-g -coverage" --compiler ${{ env.FC }} --c-compiler gcc
bash ci/ci.sh
- name: Coverage
run: bash ci/ci.sh coverage
if: ${{ env.FC == 'gfortran' }}
- name: Upload coverage reports to Codecov
if: ${{ env.FC == 'gfortran' }}
uses: codecov/codecov-action@v4.0.1
with:
token: ${{ secrets.CODECOV_TOKEN }}
slug: ipqa-research/yaeos
Python-API:
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest]
python-version: ["3.12"]
toolchain:
- {compiler: gcc, version: 13}
steps:
- name: Checkout code
uses: actions/checkout@v2
with:
submodules: false
- name: Install Python
uses: actions/setup-python@v1 # Use pip to install latest CMake, & FORD/Jin2For, etc.
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
sudo apt-get install libnlopt-dev pandoc
- name: install tox
run: |
pip install tox tox-gh-actions
- name: Setup Fortran Compiler
uses: fortran-lang/setup-fortran@v1
id: setup-fortran
with:
compiler: ${{ matrix.toolchain.compiler }}
version: ${{ matrix.toolchain.version }}
- name: Run tox
run: |
cd python && tox -r
build_wheels:
needs: Python-API
name: Build wheels on ${{ matrix.os }}
runs-on: ${{ matrix.os }}
strategy:
fail-fast: false
matrix:
os: [ubuntu-latest] #, windows-latest, macos-13, macos-14]
steps:
- uses: actions/checkout@v4
# Used to host cibuildwheel
- uses: actions/setup-python@v5
# Install gfortran on each OS
- name: Setup Fortran Compiler
uses: fortran-lang/setup-fortran@v1
id: setup-fortran
with:
compiler: gcc
version: 12
# Install fpm for Windows
- name: Install fpm
uses: fortran-lang/setup-fpm@v5
with:
github-token: ${{ secrets.GITHUB_TOKEN }}
# CiBuildWheel
- name: Install dependencies
run: |
python -m pip install cibuildwheel==2.19.2
- name: Build wheels
run: python -m cibuildwheel python/ --output-dir wheelhouse --debug-traceback
# to supply options, put them in 'env', like:
env:
# CIBW_BUILD_VERBOSITY: 3
CIBW_BUILD_FRONTEND: build
# MACOSX_DEPLOYMENT_TARGET: "13.0"
CIBW_BEFORE_TEST: pip install pytest
CIBW_TEST_COMMAND: pytest {project}/python/tests --import-mode=importlib
- uses: actions/upload-artifact@v4
with:
name: cibw-wheels-${{ matrix.os }}
path: ./wheelhouse/*.whl
publish_to_testpypi:
name: Publish Python 🐍 wheels 🛞 to PyPI
if: github.event_name == 'release'
needs: build_wheels
runs-on: ubuntu-latest
environment:
name: pypi
url: https://test.pypi.org/p/yaeos
permissions:
id-token: write # IMPORTANT: mandatory for trusted publishing
steps:
- name: Download all the dists
uses: actions/download-artifact@v4
with:
path: dist/
pattern: cibw-wheels-*
merge-multiple: true
- run: ls -R dist
- name: Publish distribution 📦 to PyPI
uses: pypa/gh-action-pypi-publish@release/v1