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Fix #559, Resolve doxygen warnings #648

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175 changes: 9 additions & 166 deletions cmake/cfe-common.doxyfile.in
Original file line number Diff line number Diff line change
Expand Up @@ -2,12 +2,7 @@
# Project related configuration options, shared for all cFE doxygen outputs
#---------------------------------------------------------------------------
@INCLUDE_PATH = @MISSION_SOURCE_DIR@
DOXYFILE_ENCODING = UTF-8
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Were all deleted settings the defaults?

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Yes

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Where can a user go find what the defaults are?

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doxygen will create a config file with the defaults, doxygen -g configfile

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Would it be worthwhile to add a comment that says "to see defaults run doxygen -g configfile" ?

As we experienced last week, doxygen knowledge is sparse, and this might help.

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It's on the man page...

CREATE_SUBDIRS = NO
OUTPUT_LANGUAGE = English
OUTPUT_DIRECTORY = .
BRIEF_MEMBER_DESC = YES
REPEAT_BRIEF = YES
ABBREVIATE_BRIEF = "The $name class " \
"The $name widget " \
"The $name file " \
Expand All @@ -19,15 +14,6 @@ ABBREVIATE_BRIEF = "The $name class " \
a \
an \
the
ALWAYS_DETAILED_SEC = NO
INLINE_INHERITED_MEMB = NO
FULL_PATH_NAMES = YES
SHORT_NAMES = NO
JAVADOC_AUTOBRIEF = NO
QT_AUTOBRIEF = NO
MULTILINE_CPP_IS_BRIEF = NO
INHERIT_DOCS = YES
SEPARATE_MEMBER_PAGES = NO
TAB_SIZE = 8
ALIASES += "event=\xrefitem cfeevents \"Event Message\" \"cFE Event Message Cross Reference\" " \
"cfeescfg=\xrefitem cfeescfg \"Purpose\" \"cFE Executive Services Configuration Parameters\" " \
Expand All @@ -50,216 +36,74 @@ ALIASES += "event=\xrefitem cfeevents \"Event Message\" \"cFE Even
"cfecmdmnemonic=\xrefitem cfecmdmnems \"Command Mnemonic(s)\" \"cFE Command Mnemonic Cross Reference\" " \
"cfetlmmnemonic=\xrefitem cfetlmmnems \"Telemetry Mnemonic(s)\" \"cFE Telemetry Mnemonic Cross Reference\" "
OPTIMIZE_OUTPUT_FOR_C = YES
OPTIMIZE_OUTPUT_JAVA = NO
BUILTIN_STL_SUPPORT = NO
CPP_CLI_SUPPORT = NO
SIP_SUPPORT = NO
DISTRIBUTE_GROUP_DOC = NO
SUBGROUPING = YES
TYPEDEF_HIDES_STRUCT = NO
#---------------------------------------------------------------------------
# Build related configuration options
#---------------------------------------------------------------------------
EXTRACT_ALL = YES
EXTRACT_PRIVATE = YES
EXTRACT_STATIC = YES
EXTRACT_LOCAL_CLASSES = YES
EXTRACT_LOCAL_METHODS = NO
EXTRACT_ANON_NSPACES = NO
HIDE_UNDOC_MEMBERS = NO
HIDE_UNDOC_CLASSES = NO
HIDE_FRIEND_COMPOUNDS = NO
HIDE_IN_BODY_DOCS = NO
INTERNAL_DOCS = NO
CASE_SENSE_NAMES = NO
HIDE_SCOPE_NAMES = NO
SHOW_INCLUDE_FILES = YES
INLINE_INFO = YES
SORT_MEMBER_DOCS = YES
SORT_BRIEF_DOCS = NO
SORT_BY_SCOPE_NAME = NO
GENERATE_TODOLIST = NO
GENERATE_TESTLIST = YES
GENERATE_BUGLIST = YES
GENERATE_DEPRECATEDLIST= YES
ENABLED_SECTIONS =
MAX_INITIALIZER_LINES = 30
SHOW_USED_FILES = YES
FILE_VERSION_FILTER =
#---------------------------------------------------------------------------
# configuration options related to warning and progress messages
#---------------------------------------------------------------------------
QUIET = NO
WARNINGS = YES
WARN_IF_UNDOCUMENTED = YES
WARN_IF_DOC_ERROR = YES
WARN_NO_PARAMDOC = YES
WARN_FORMAT = "$file:$line: $text "
WARN_LOGFILE = @CMAKE_BINARY_DIR@/doc/warnings.log
#---------------------------------------------------------------------------
# configuration options related to the input files
#---------------------------------------------------------------------------
INPUT_ENCODING = UTF-8
STRIP_FROM_PATH = @MISSION_SOURCE_DIR@
STRIP_FROM_PATH = @MISSION_SOURCE_DIR@

# Always include a standard set of CFE documentation in the input set
# This is applicable to both users guide and detail design outputs
IMAGE_PATH += @MISSION_SOURCE_DIR@/cfe/docs/src
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_es.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_evs.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_sb.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_tbl.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_time.dox
IMAGE_PATH += @MISSION_SOURCE_DIR@/cfe/docs/src
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_glossary.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_api.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_es.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_evs.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_sb.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_tbl.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_time.dox
INPUT += @MISSION_SOURCE_DIR@/cfe/docs/src/cfe_xref.dox

FILE_PATTERNS = *.c *.cpp *.cc *.C *.h *.hh *.hpp *.H *.dox *.md
RECURSIVE = YES
EXCLUDE =
EXCLUDE_SYMLINKS = NO
EXCLUDE_PATTERNS =
EXCLUDE_SYMBOLS =
EXAMPLE_PATH =
EXAMPLE_PATTERNS = *
EXAMPLE_RECURSIVE = NO
INPUT_FILTER =
FILTER_PATTERNS =
FILTER_SOURCE_FILES = NO
#---------------------------------------------------------------------------
# configuration options related to source browsing
#---------------------------------------------------------------------------
SOURCE_BROWSER = YES
INLINE_SOURCES = NO
STRIP_CODE_COMMENTS = YES
REFERENCED_BY_RELATION = YES
REFERENCES_RELATION = YES
REFERENCES_LINK_SOURCE = YES
USE_HTAGS = NO
VERBATIM_HEADERS = YES
#---------------------------------------------------------------------------
# configuration options related to the alphabetical class index
#---------------------------------------------------------------------------
ALPHABETICAL_INDEX = YES
COLS_IN_ALPHA_INDEX = 5
IGNORE_PREFIX =
#---------------------------------------------------------------------------
# configuration options related to the HTML output
#---------------------------------------------------------------------------
GENERATE_HTML = YES
HTML_OUTPUT = html
HTML_FILE_EXTENSION = .html
HTML_HEADER =
HTML_FOOTER =
HTML_STYLESHEET =
GENERATE_HTMLHELP = NO
HTML_DYNAMIC_SECTIONS = NO
CHM_FILE =
HHC_LOCATION =
GENERATE_CHI = NO
BINARY_TOC = NO
TOC_EXPAND = NO
DISABLE_INDEX = NO
ENUM_VALUES_PER_LINE = 4
GENERATE_TREEVIEW = NO
TREEVIEW_WIDTH = 250
#---------------------------------------------------------------------------
# configuration options related to the LaTeX output
#---------------------------------------------------------------------------
GENERATE_LATEX = NO
LATEX_OUTPUT = latex
LATEX_CMD_NAME = latex
MAKEINDEX_CMD_NAME = makeindex
COMPACT_LATEX = YES
PAPER_TYPE = letter
EXTRA_PACKAGES =
LATEX_HEADER =
PDF_HYPERLINKS = YES
USE_PDFLATEX = YES
LATEX_BATCHMODE = NO
LATEX_HIDE_INDICES = NO
#---------------------------------------------------------------------------
# configuration options related to the RTF output
#---------------------------------------------------------------------------
GENERATE_RTF = NO
RTF_OUTPUT = rtf
COMPACT_RTF = YES
RTF_HYPERLINKS = NO
RTF_STYLESHEET_FILE =
RTF_EXTENSIONS_FILE =
#---------------------------------------------------------------------------
# configuration options related to the man page output
#---------------------------------------------------------------------------
GENERATE_MAN = NO
MAN_OUTPUT = man
MAN_EXTENSION = .3
MAN_LINKS = NO
#---------------------------------------------------------------------------
# configuration options related to the XML output
#---------------------------------------------------------------------------
GENERATE_XML = NO
XML_OUTPUT = xml
XML_PROGRAMLISTING = YES
#---------------------------------------------------------------------------
# configuration options for the AutoGen Definitions output
#---------------------------------------------------------------------------
GENERATE_AUTOGEN_DEF = NO
#---------------------------------------------------------------------------
# configuration options related to the Perl module output
#---------------------------------------------------------------------------
GENERATE_PERLMOD = NO
PERLMOD_LATEX = NO
PERLMOD_PRETTY = YES
PERLMOD_MAKEVAR_PREFIX =
#---------------------------------------------------------------------------
# Configuration options related to the preprocessor
#---------------------------------------------------------------------------
ENABLE_PREPROCESSING = YES
MACRO_EXPANSION = NO
EXPAND_ONLY_PREDEF = NO
SEARCH_INCLUDES = YES
INCLUDE_PATH =
INCLUDE_FILE_PATTERNS =
EXPAND_AS_DEFINED =
SKIP_FUNCTION_MACROS = YES
#---------------------------------------------------------------------------
# Configuration::additions related to external references
#---------------------------------------------------------------------------
TAGFILES =
GENERATE_TAGFILE =
ALLEXTERNALS = NO
EXTERNAL_GROUPS = YES
PERL_PATH = /usr/bin/perl
#---------------------------------------------------------------------------
# Configuration options related to the dot tool
#---------------------------------------------------------------------------
CLASS_DIAGRAMS = NO
MSCGEN_PATH =
HIDE_UNDOC_RELATIONS = YES
HAVE_DOT = YES
CLASS_GRAPH = NO
COLLABORATION_GRAPH = NO
GROUP_GRAPHS = YES
UML_LOOK = NO
TEMPLATE_RELATIONS = NO
INCLUDE_GRAPH = NO
INCLUDED_BY_GRAPH = NO
CALL_GRAPH = YES
CALLER_GRAPH = NO
GRAPHICAL_HIERARCHY = NO
DIRECTORY_GRAPH = YES
DOT_IMAGE_FORMAT = png
DOT_PATH =
DOTFILE_DIRS =
DOT_GRAPH_MAX_NODES = 50
MAX_DOT_GRAPH_DEPTH = 1000
DOT_TRANSPARENT = NO
DOT_MULTI_TARGETS = NO
GENERATE_LEGEND = YES
DOT_CLEANUP = YES
#---------------------------------------------------------------------------
# Configuration::additions related to the search engine
#---------------------------------------------------------------------------
SEARCHENGINE = NO

#---------------------------------------------------------------------------
# CFE mnemonic mappings
#---------------------------------------------------------------------------
Expand All @@ -273,4 +117,3 @@ SEARCHENGINE = NO
@INCLUDE = @MISSION_SOURCE_DIR@/cfe/docs/src/mnem_maps/cfe_evs_tlm_mnem_map
@INCLUDE = @MISSION_SOURCE_DIR@/cfe/docs/src/mnem_maps/cfe_sb_cmd_mnem_map
@INCLUDE = @MISSION_SOURCE_DIR@/cfe/docs/src/mnem_maps/cfe_sb_tlm_mnem_map

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