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@ocbe-uio

Oslo Centre for Biostatistics and Epidemiology

This is where we host some of the scientific software we produce at OCBE, a joint center between the University of Oslo and the Oslo University Hospital.

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  1. BayesMallows BayesMallows Public

    R-package for Bayesian preference learning with the Mallows rank model.

    R 21 9

  2. teaching_mf9130e teaching_mf9130e Public

    Course material for MF9130E

    R 15 10

  3. DIscBIO DIscBIO Public

    A user-friendly R pipeline for biomarker discovery in single-cell transcriptomics

    Jupyter Notebook 12 5

  4. survomics survomics Public

    Tutorial on survival modeling with omics data

    TeX 11 1

  5. rBAPS rBAPS Public

    R implementation of the BAPS software for Bayesian Analysis of Population Structure

    R 10 4

  6. trajpy trajpy Public

    Trajpy - empowering feature engineering for trajectory analysis across domains.

    Python 6 2

Repositories

Showing 10 of 53 repositories
  • burst Public

    Code for the BURST trial

    ocbe-uio/burst’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Oct 8, 2024
  • BayesSurvive Public

    Bayesian survival models for high-dimensional data

    ocbe-uio/BayesSurvive’s past year of commit activity
    R 1 GPL-3.0 1 2 0 Updated Oct 4, 2024
  • pCRscore Public

    Python package to calculate pCR scores

    ocbe-uio/pCRscore’s past year of commit activity
    Python 0 GPL-3.0 0 1 0 Updated Oct 2, 2024
  • Melanoma-Incidence-in-Norway Public

    R scripts used in the analysis of Melanoma incidence in Norway, 1983–2019

    ocbe-uio/Melanoma-Incidence-in-Norway’s past year of commit activity
    R 0 0 0 0 Updated Oct 1, 2024
  • bd4predict Public

    BD4QoLPredict is an API and Dashboard developed in the context of the BD4QoL European project for improving quality of life of head and neck cancer survivors.

    ocbe-uio/bd4predict’s past year of commit activity
    Python 0 0 0 0 Updated Sep 30, 2024
  • rBAPS Public

    R implementation of the BAPS software for Bayesian Analysis of Population Structure

    ocbe-uio/rBAPS’s past year of commit activity
    R 10 GPL-3.0 4 9 (2 issues need help) 0 Updated Sep 27, 2024
  • BAPS Public

    Bayesian Analysis of Population Structure

    ocbe-uio/BAPS’s past year of commit activity
    MATLAB 0 0 4 0 Updated Sep 27, 2024
  • TruncExpFam Public

    R package to generate data related to the Truncated Exponential Family

    ocbe-uio/TruncExpFam’s past year of commit activity
    R 0 GPL-3.0 1 2 0 Updated Sep 26, 2024
  • kids-chd Public

    Congenital Heart Disease among Children

    ocbe-uio/kids-chd’s past year of commit activity
    R 0 GPL-3.0 0 4 0 Updated Sep 25, 2024
  • pyPhenoPop Public

    Phenotypic deconvolution in heterogeneous cancer cell populations using drug screen data

    ocbe-uio/pyPhenoPop’s past year of commit activity
    Python 2 MIT 1 0 0 Updated Sep 19, 2024
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