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    9 repositories

    • fissa

      Public
      A Python toolbox for Fast Image Signal Separation Analysis, designed for Calcium Imaging data.
      Python
      •
      GNU General Public License v3.0
      •26•29•16•2•Updated Oct 7, 2024Oct 7, 2024

    • Padamsey-et-al-Neuron-2022

      Public
      Padamsey*, Katsanevaki, Dupuy and Rochefort*
      Jupyter Notebook
      •1•0•0•0•Updated Sep 30, 2024Sep 30, 2024

    • fissa-suite2p-example

      Public
      This repository provides the notebook for the Binder environment which allows us to run Suite2p.
      HTML
      •
      GNU General Public License v3.0
      •0•0•0•1•Updated Mar 25, 2022Mar 25, 2022

    • Francioni-et-al.-eLife-2019

      Public
      MATLAB
      •
      MIT License
      •2•0•0•0•Updated Apr 29, 2021Apr 29, 2021

    • Henschke_et_al_CurrBiology2020

      Public
      Henschke*, Dylda*, Katsanevaki*, Dupuy, Currie, Amvrosiadis, Pakan* and Rochefort*. Current Biology, 2020.
      MATLAB
      •1•0•0•0•Updated Apr 9, 2020Apr 9, 2020

    • SimCalc

      Public
      SimCalc simulates calcium imaging data, with the option for different neural shapes and locations
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jun 27, 2019Jun 27, 2019

    • Pakanetal_CellReport2018

      Public
      Pakan, Currie, Fischer, Rochefort, Cell Report 2018
      MATLAB
      •0•1•0•0•Updated Aug 30, 2018Aug 30, 2018

    • sima

      Public
      Python package for analysis of dynamic fluorescence microscopy data
      Python
      •
      GNU General Public License v2.0
      •50•0•0•0•Updated Mar 8, 2018Mar 8, 2018

    • m2html

      Public
      Documentation System for MATLAB in HTML
      MATLAB
      •
      Other
      •5•5•0•1•Updated Feb 9, 2017Feb 9, 2017