install imagecodecs and openslide-python dependencies so additional tests will run

[grlee77]

This MR may initially fail during wheel testing due to #626, as a few test cases relying on these packages were not being run at the time #619 was merged.

[grlee77]

Okay, libopenslide is now being found and the test_converter case passes. There is a single test failure corresponding to #626 and for some reason also a segfault upon pytest exit. This is the end of the log

FAILED python/cucim/tests/unit/clara/test_image_cache.py::test_cache_hit_miss - assert (0, 0) == (0, 1)
  At index 1 diff: 0 != 1
  Full diff:
  - (0, 1)
  ?     ^
  + (0, 0)
  ?     ^
==== 1 failed, 9665 passed, 42 skipped, 127 warnings in 2718.67s (0:45:18) =====
pure virtual method called
terminate called without an active exception
ci/test_wheel.sh: line 34:  1078 Aborted                 (core dumped) python -m pytest ./python/cucim
Error: Process completed with exit code 134.

[jakirkham]

^ @gigony

[jakirkham]

Thanks Greg! 🙏

Had a follow up question below (assuming this change works)

[jakirkham]

Would it be possible to move these to PyTest decorators?

We could also use skipif to more carefully restrict when they are skipped

@pytest.mark.skip(reason="currently fails")
def test_cache_hit_miss():
    ...
 
@pytest.mark.skip(reason="passes, but a segfault occurs on pytest exit when it is enabled")
def test_converter():
    ...

[jakirkham]

After a bit of effort Gigon was able to reproduce this when we met yesterday using a Ubuntu 18 Docker container and installing the wheel. With a bit of debugging it appears this goes back to an old cuFile issue that we thought had been fixed with PR ( #158 ). However it appears this issue is back

[jakirkham]

After further discussion offline, it sounds like the cuFile bug persists in CUDA 11. So we are opting to skip related tests on CUDA 11

This problem does not occur in CUDA 12. So we run all test there

[jakirkham]

After discussion with Greg offline, we decided to move this to 24.02 as we are already in code freeze for 23.12

[jakirkham]

Style check failure is unrelated. It is coming from the version update script. Attempting to address in PR ( #648 )

[gigony]

Thanks @grlee77 ! Looks good to me!

[jakirkham]

/merge

[jakirkham]

Thanks all! 🙏