[ICLR'24 spotlight] Saprot: Protein Language Model with Structural Alphabet
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Updated
Sep 18, 2024 - Python
[ICLR'24 spotlight] Saprot: Protein Language Model with Structural Alphabet
Protein Language Model
ProtFlash: A lightweight protein language model
Implementation of PocketGen: Generating Full-Atom Ligand-Binding Protein Pockets
Nature Biotechnology: Ultra-fast, sensitive detection of protein remote homologs using deep dense retrieval
Directed evolution of proteins in sequence space with gradients
SaprotHub: Making Protein Modeling Accessible to All Biologists
Exploring Evolution-aware & free protein language models as protein function predictors
Inference code for PoET: A generative model of protein families as sequences-of-sequences
Detection of remote homology by comparison of protein language model representations
ProTrek: Navigating the Protein Universe through Tri-Modal Contrastive Learning
PaccMann models for protein language modeling
Protein language model trained on coding DNA
Spectral Framework For AI Model Evaluation
An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.
Latent-based Directed Evolution guided by Gradient Ascent for Protein Design
pLM-informed E(3) equivariant deep graph neural networks for protein-nucleic acid binding site prediction
AutoML system for building trustworthy peptide bioactivity predictors
In silico protein surgery using ESM.
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