v3 release

This is the third release of source code and analysis output files for our study:

• Thomas MF, Slowikowski K, Manakongtreecheep K, Sen P, Tantivit J, Nasrallah M, et al. Altered interactions between circulating and tissue-resident CD8 T cells with the colonic mucosa define colitis associated with immune checkpoint inhibitors. bioRxiv. 2021. p. 2021.09.17.460868. doi:10.1101/2021.09.17.460868

This v3 release adds data for Luoma CD4 T cells and Luoma CD8 T cells to the file analysis/output/de-ova.tsv.gz.

v2 release

This is the second release of source code and analysis output files for our study:

• Thomas MF, Slowikowski K, Manakongtreecheep K, Sen P, Tantivit J, Nasrallah M, et al. Altered interactions between circulating and tissue-resident CD8 T cells with the colonic mucosa define colitis associated with immune checkpoint inhibitors. bioRxiv. 2021. p. 2021.09.17.460868. doi:10.1101/2021.09.17.460868

In the previous v1 release, GitHub was not configured to upload Git LFS files to Zenodo. This v2 release should have those files uploaded to Zenodo.

Initial release

The initial release of source code and analysis output files for our study:

• Thomas MF, Slowikowski K, Manakongtreecheep K, Sen P, Tantivit J, Nasrallah M, et al. Altered interactions between circulating and tissue-resident CD8 T cells with the colonic mucosa define colitis associated with immune checkpoint inhibitors. bioRxiv. 2021. p. 2021.09.17.460868. doi:10.1101/2021.09.17.460868