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using conda in github actions #304

using conda in github actions

using conda in github actions #304

name: Test with Ubuntu, Mamba
on: [push]
jobs:
build:
runs-on: ubuntu-latest
strategy:
max-parallel: 5
fail-fast: false
matrix:
python-version: ['3.9', '3.10', '3.11', '3.12']
defaults:
run:
shell: bash -l {0}
steps:
- uses: actions/checkout@v4
- name: Set up Python from Miniconda/conda
uses: conda-incubator/setup-miniconda@v2.2.0
with:
miniconda-version: latest
mamba-version: "*"
channels: conda-forge,defaults
channel-priority: true
activate-environment: anaconda-client-env
python-version: ${{ matrix.python-version }}
- name: Install conda dependencies
run: |
printenv
conda install -y -c conda-forge python=${{ matrix.python-version }} "numpy>=1.23" "scipy>=1.8" "matplotlib>=3.6" "h5py>=3.5" "wxpython>=4.2" scikit-image scikit-learn pandas jupyter plotly pyparsing pytest pytest-cov coverage
- name: Install xraylarch and other dependencies with pip
run: |
pip install ".[all]"
- name: Run test suite
run: |
cd tests
python -m pytest