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Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m #103

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connorcoley
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39 reaction library listed in Table 2. Details are rather sparse, but this is a nice library generated in flow through a single-step reaction.

Template reaction made using the online editor & manually changing yield entries to be placeholders. Excel sheet with all reactants (mols drawn in Chemdraw) and yields. Short script used to enumerate product SMILES.

Note that there is more detail in the paper on product outcomes (states, colors, analytical data for isolated products) than I've copied. The two performance metrics I focused on were those in Table 2: crude NMR yield and isolated yield after workup. We're missing details about the pump type, reactor tube diameter, and how it was warmed. But this at least uses the addition flowrate yield and flow condition details.

Archive.zip

@connorcoley connorcoley requested review from skearnes and michaelmaser and removed request for skearnes June 26, 2021 21:19
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LGTM. Agree sparse in detail but procedure is pretty simple; suppose that's sort of the point.

Loaded the reactions_out.csv and checked product structures, looks good. Yield data all matches and reaction renderings in the editor match for a random handful of reactions. Agree think only things to add would be color details and NMR peaks, but not super relevant for this dataset and we've demonstrated them in others. Don't think I have anything to change.

Thanks!

@connorcoley connorcoley merged commit f7f8a62 into open-reaction-database:flow Jun 30, 2021
@connorcoley connorcoley deleted the flow-contribution branch June 30, 2021 22:47
connorcoley added a commit that referenced this pull request Jul 1, 2021
…) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
skearnes added a commit that referenced this pull request Jul 2, 2021
* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
skearnes added a commit that referenced this pull request Jul 6, 2021
* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
skearnes added a commit that referenced this pull request Jul 7, 2021
* Merge 'main' into #86 (#105)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Merge 'main' into #86 (#107)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Add hein-dataset.pbtxt (#86)

* Add hein-dataset.pbtxt

* fix product duplication

* Fix catalyst SMILES

* updates

* updates

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
connorcoley added a commit that referenced this pull request Jul 22, 2021
* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

* #86 (#108)

* Merge 'main' into #86 (#105)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Merge 'main' into #86 (#107)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Add hein-dataset.pbtxt (#86)

* Add hein-dataset.pbtxt

* fix product duplication

* Fix catalyst SMILES

* updates

* updates

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Merge #93 into main (#109)

* Merge main into 93 (#101)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Uploading Dataset for https://doi.org/10.1039/C5SC04751J Partial Figure 4 (#93)

* Add files via upload

* Update File

* Reupload with correct internal standard concentration

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>

* Expt2 10.1021/acs.accounts.0c00760 (#100) (#114)

* Expt2 10.1021/acs.accounts.0c00760 (#100)

* Add files via upload

* Delete Figure4_dataset.pbtxt

* Uploading Data for 10.1021/acs.accounts.0c00760

* Add files via upload

Co-authored-by: Steven Kearnes <kearnes@google.com>

* Update submission

* Update badges

Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update DOI list (#111)

* bump ord-schema version

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
brilee added a commit that referenced this pull request Jul 28, 2021
* Electroreductive coupling of Alkenyl and Benzyl Halides

* Fix validation errors

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update delano dataset

* Upload dataset as .pb.gz

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

* #86 (#108)

* Merge 'main' into #86 (#105)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Merge 'main' into #86 (#107)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Add hein-dataset.pbtxt (#86)

* Add hein-dataset.pbtxt

* fix product duplication

* Fix catalyst SMILES

* updates

* updates

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Merge #93 into main (#109)

* Merge main into 93 (#101)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Uploading Dataset for https://doi.org/10.1039/C5SC04751J Partial Figure 4 (#93)

* Add files via upload

* Update File

* Reupload with correct internal standard concentration

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>

* Expt2 10.1021/acs.accounts.0c00760 (#100) (#114)

* Expt2 10.1021/acs.accounts.0c00760 (#100)

* Add files via upload

* Delete Figure4_dataset.pbtxt

* Uploading Data for 10.1021/acs.accounts.0c00760

* Add files via upload

Co-authored-by: Steven Kearnes <kearnes@google.com>

* Update submission

* Update badges

Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update DOI list (#111)

* bump ord-schema version

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update with optical rotations

* Fix negative float validations.

* Update dataset description for Electrochem dataset.

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
brilee added a commit that referenced this pull request Jul 28, 2021
* Updating electrochem branch from main (#115)

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

* #86 (#108)

* Merge 'main' into #86 (#105)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Merge 'main' into #86 (#107)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Add hein-dataset.pbtxt (#86)

* Add hein-dataset.pbtxt

* fix product duplication

* Fix catalyst SMILES

* updates

* updates

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Merge #93 into main (#109)

* Merge main into 93 (#101)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Uploading Dataset for https://doi.org/10.1039/C5SC04751J Partial Figure 4 (#93)

* Add files via upload

* Update File

* Reupload with correct internal standard concentration

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>

* Expt2 10.1021/acs.accounts.0c00760 (#100) (#114)

* Expt2 10.1021/acs.accounts.0c00760 (#100)

* Add files via upload

* Delete Figure4_dataset.pbtxt

* Uploading Data for 10.1021/acs.accounts.0c00760

* Add files via upload

Co-authored-by: Steven Kearnes <kearnes@google.com>

* Update submission

* Update badges

Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update DOI list (#111)

* bump ord-schema version

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>

* Electroreductive coupling of Alkenyl and Benzyl Halides (#98)

* Electroreductive coupling of Alkenyl and Benzyl Halides

* Fix validation errors

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update delano dataset

* Upload dataset as .pb.gz

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

* #86 (#108)

* Merge 'main' into #86 (#105)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Merge 'main' into #86 (#107)

* Cc submission biginelli (#83)

* Update to match 'main' (#82)

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

Co-authored-by: github-actions <github-actions@github.com>

* Biginelli dataset (#78)

* Biginelli dataset

* Add dataset from Novartis (#79)

* Add dataset from Novartis

* Update submission

* Update badges

* Updates from @connorcoley (#80)

* Updates from @connorcoley

* Update badges

* use pbtxt

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema to v0.3.4 (#81)

* Update dataset name

* Revert "Biginelli dataset"

This reverts commit 97c3cdd.

* New biginelli dataset (renamed)

* Updates after reviews

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update submission

* Update badges

Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Bump ord-schema version to 0.3.9 (#88)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* OrgSyn example from ord_schema (#95) (#102)

* OrgSyn example from ord_schema (#95)

* OrgSyn example from ord_schema

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

* Revisions, adding workup

* Addition order

* Extra drying step

* Fix reaction role

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)

* Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* Use conda's pip (#106)

* bump ord-schema version

* Use conda's pip

Avoids having two versions of pandas installed, which is causing the build to fail.

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Add hein-dataset.pbtxt (#86)

* Add hein-dataset.pbtxt

* fix product duplication

* Fix catalyst SMILES

* updates

* updates

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Merge #93 into main (#109)

* Merge main into 93 (#101)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)

* Coupling of α-carboxyl sp3-carbons with aryl halides (#84)

* New biginelli dataset (renamed)

* Updates after reviews

* Photoredox submission

* Remove biginelli from fork (bad branch management)

* Fix Iridium charge state

* Update submission

* Update badges

Co-authored-by: github-actions <github-actions@github.com>

* bump ord-schema version (#96)

* Huffman islatravir dataset submission (#91) (#94)

* Huffman islatravir dataset submission (#91)

* Update submission

* Update badges

* resolve reactions.svg conflict

* Update badges

* Reset reaction IDs to workaround a bug in updates.py

* Update submission

Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>

* upload new data (#97) (#99)

* upload new data (#97)

* upload data

https://doi.org/10.26434/chemrxiv.14388557.v1

* delete old data

* upload new version of data

Added ligand name, double checked ligand structures

* Update submission

* Update badges

Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>

* Uploading Dataset for https://doi.org/10.1039/C5SC04751J Partial Figure 4 (#93)

* Add files via upload

* Update File

* Reupload with correct internal standard concentration

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>

* Expt2 10.1021/acs.accounts.0c00760 (#100) (#114)

* Expt2 10.1021/acs.accounts.0c00760 (#100)

* Add files via upload

* Delete Figure4_dataset.pbtxt

* Uploading Data for 10.1021/acs.accounts.0c00760

* Add files via upload

Co-authored-by: Steven Kearnes <kearnes@google.com>

* Update submission

* Update badges

Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: github-actions <github-actions@github.com>

* Update DOI list (#111)

* bump ord-schema version

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update README.md

* Update with optical rotations

* Fix negative float validations.

* Update dataset description for Electrochem dataset.

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>

* Update submission

* Update badges

Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
Co-authored-by: github-actions <github-actions@github.com>
Co-authored-by: Steven Kearnes <kearnes@google.com>
Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
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