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Merge in #98 #117

Merged
merged 6 commits into from
Jul 28, 2021
Merged

Merge in #98 #117

merged 6 commits into from
Jul 28, 2021

Commits on Jul 22, 2021

  1. Updating electrochem branch from main (#115)

    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * OrgSyn example from ord_schema (#95) (#102)
    
    * OrgSyn example from ord_schema (#95)
    
    * OrgSyn example from ord_schema
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Revisions, adding workup
    
    * Addition order
    
    * Extra drying step
    
    * Fix reaction role
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Use conda's pip (#106)
    
    * bump ord-schema version
    
    * Use conda's pip
    
    Avoids having two versions of pandas installed, which is causing the build to fail.
    
    * #86 (#108)
    
    * Merge 'main' into #86 (#105)
    
    * Cc submission biginelli (#83)
    
    * Update to match 'main' (#82)
    
    * Add dataset from Novartis (#79)
    
    * Add dataset from Novartis
    
    * Update submission
    
    * Update badges
    
    * Updates from @connorcoley (#80)
    
    * Updates from @connorcoley
    
    * Update badges
    
    * use pbtxt
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema to v0.3.4 (#81)
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Biginelli dataset (#78)
    
    * Biginelli dataset
    
    * Add dataset from Novartis (#79)
    
    * Add dataset from Novartis
    
    * Update submission
    
    * Update badges
    
    * Updates from @connorcoley (#80)
    
    * Updates from @connorcoley
    
    * Update badges
    
    * use pbtxt
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema to v0.3.4 (#81)
    
    * Update dataset name
    
    * Revert "Biginelli dataset"
    
    This reverts commit 97c3cdd.
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema version to 0.3.9 (#88)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * OrgSyn example from ord_schema (#95) (#102)
    
    * OrgSyn example from ord_schema (#95)
    
    * OrgSyn example from ord_schema
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Revisions, adding workup
    
    * Addition order
    
    * Extra drying step
    
    * Fix reaction role
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Merge 'main' into #86 (#107)
    
    * Cc submission biginelli (#83)
    
    * Update to match 'main' (#82)
    
    * Add dataset from Novartis (#79)
    
    * Add dataset from Novartis
    
    * Update submission
    
    * Update badges
    
    * Updates from @connorcoley (#80)
    
    * Updates from @connorcoley
    
    * Update badges
    
    * use pbtxt
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema to v0.3.4 (#81)
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Biginelli dataset (#78)
    
    * Biginelli dataset
    
    * Add dataset from Novartis (#79)
    
    * Add dataset from Novartis
    
    * Update submission
    
    * Update badges
    
    * Updates from @connorcoley (#80)
    
    * Updates from @connorcoley
    
    * Update badges
    
    * use pbtxt
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema to v0.3.4 (#81)
    
    * Update dataset name
    
    * Revert "Biginelli dataset"
    
    This reverts commit 97c3cdd.
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema version to 0.3.9 (#88)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * OrgSyn example from ord_schema (#95) (#102)
    
    * OrgSyn example from ord_schema (#95)
    
    * OrgSyn example from ord_schema
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Revisions, adding workup
    
    * Addition order
    
    * Extra drying step
    
    * Fix reaction role
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Use conda's pip (#106)
    
    * bump ord-schema version
    
    * Use conda's pip
    
    Avoids having two versions of pandas installed, which is causing the build to fail.
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Add hein-dataset.pbtxt (#86)
    
    * Add hein-dataset.pbtxt
    
    * fix product duplication
    
    * Fix catalyst SMILES
    
    * updates
    
    * updates
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Merge #93 into main (#109)
    
    * Merge main into 93 (#101)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Uploading Dataset for https://doi.org/10.1039/C5SC04751J Partial Figure 4 (#93)
    
    * Add files via upload
    
    * Update File
    
    * Reupload with correct internal standard concentration
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
    
    * Expt2 10.1021/acs.accounts.0c00760 (#100) (#114)
    
    * Expt2 10.1021/acs.accounts.0c00760 (#100)
    
    * Add files via upload
    
    * Delete Figure4_dataset.pbtxt
    
    * Uploading Data for 10.1021/acs.accounts.0c00760
    
    * Add files via upload
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Update DOI list (#111)
    
    * bump ord-schema version
    
    * Update README.md
    
    * Update README.md
    
    * Update README.md
    
    * Update README.md
    
    * Update README.md
    
    * Update README.md
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
    7 people authored Jul 22, 2021
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Commits on Jul 28, 2021

  1. Electroreductive coupling of Alkenyl and Benzyl Halides (#98)

    * Electroreductive coupling of Alkenyl and Benzyl Halides
    
    * Fix validation errors
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * OrgSyn example from ord_schema (#95) (#102)
    
    * OrgSyn example from ord_schema (#95)
    
    * OrgSyn example from ord_schema
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Revisions, adding workup
    
    * Addition order
    
    * Extra drying step
    
    * Fix reaction role
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Update delano dataset
    
    * Upload dataset as .pb.gz
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Use conda's pip (#106)
    
    * bump ord-schema version
    
    * Use conda's pip
    
    Avoids having two versions of pandas installed, which is causing the build to fail.
    
    * #86 (#108)
    
    * Merge 'main' into #86 (#105)
    
    * Cc submission biginelli (#83)
    
    * Update to match 'main' (#82)
    
    * Add dataset from Novartis (#79)
    
    * Add dataset from Novartis
    
    * Update submission
    
    * Update badges
    
    * Updates from @connorcoley (#80)
    
    * Updates from @connorcoley
    
    * Update badges
    
    * use pbtxt
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema to v0.3.4 (#81)
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Biginelli dataset (#78)
    
    * Biginelli dataset
    
    * Add dataset from Novartis (#79)
    
    * Add dataset from Novartis
    
    * Update submission
    
    * Update badges
    
    * Updates from @connorcoley (#80)
    
    * Updates from @connorcoley
    
    * Update badges
    
    * use pbtxt
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema to v0.3.4 (#81)
    
    * Update dataset name
    
    * Revert "Biginelli dataset"
    
    This reverts commit 97c3cdd.
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema version to 0.3.9 (#88)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * OrgSyn example from ord_schema (#95) (#102)
    
    * OrgSyn example from ord_schema (#95)
    
    * OrgSyn example from ord_schema
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Revisions, adding workup
    
    * Addition order
    
    * Extra drying step
    
    * Fix reaction role
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Merge 'main' into #86 (#107)
    
    * Cc submission biginelli (#83)
    
    * Update to match 'main' (#82)
    
    * Add dataset from Novartis (#79)
    
    * Add dataset from Novartis
    
    * Update submission
    
    * Update badges
    
    * Updates from @connorcoley (#80)
    
    * Updates from @connorcoley
    
    * Update badges
    
    * use pbtxt
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema to v0.3.4 (#81)
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Biginelli dataset (#78)
    
    * Biginelli dataset
    
    * Add dataset from Novartis (#79)
    
    * Add dataset from Novartis
    
    * Update submission
    
    * Update badges
    
    * Updates from @connorcoley (#80)
    
    * Updates from @connorcoley
    
    * Update badges
    
    * use pbtxt
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema to v0.3.4 (#81)
    
    * Update dataset name
    
    * Revert "Biginelli dataset"
    
    This reverts commit 97c3cdd.
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Bump ord-schema version to 0.3.9 (#88)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * OrgSyn example from ord_schema (#95) (#102)
    
    * OrgSyn example from ord_schema (#95)
    
    * OrgSyn example from ord_schema
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Revisions, adding workup
    
    * Addition order
    
    * Extra drying step
    
    * Fix reaction role
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103) (#104)
    
    * Flow dataset from https://pubs.acs.org/doi/full/10.1021/co400012m (#103)
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Use conda's pip (#106)
    
    * bump ord-schema version
    
    * Use conda's pip
    
    Avoids having two versions of pandas installed, which is causing the build to fail.
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Add hein-dataset.pbtxt (#86)
    
    * Add hein-dataset.pbtxt
    
    * fix product duplication
    
    * Fix catalyst SMILES
    
    * updates
    
    * updates
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Merge #93 into main (#109)
    
    * Merge main into 93 (#101)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84) (#87)
    
    * Coupling of α-carboxyl sp3-carbons with aryl halides (#84)
    
    * New biginelli dataset (renamed)
    
    * Updates after reviews
    
    * Photoredox submission
    
    * Remove biginelli from fork (bad branch management)
    
    * Fix Iridium charge state
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: github-actions <github-actions@github.com>
    
    * bump ord-schema version (#96)
    
    * Huffman islatravir dataset submission (#91) (#94)
    
    * Huffman islatravir dataset submission (#91)
    
    * Update submission
    
    * Update badges
    
    * resolve reactions.svg conflict
    
    * Update badges
    
    * Reset reaction IDs to workaround a bug in updates.py
    
    * Update submission
    
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * upload new data (#97) (#99)
    
    * upload new data (#97)
    
    * upload data
    
    https://doi.org/10.26434/chemrxiv.14388557.v1
    
    * delete old data
    
    * upload new version of data
    
    Added ligand name, double checked ligand structures
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    
    * Uploading Dataset for https://doi.org/10.1039/C5SC04751J Partial Figure 4 (#93)
    
    * Add files via upload
    
    * Update File
    
    * Reupload with correct internal standard concentration
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
    
    * Expt2 10.1021/acs.accounts.0c00760 (#100) (#114)
    
    * Expt2 10.1021/acs.accounts.0c00760 (#100)
    
    * Add files via upload
    
    * Delete Figure4_dataset.pbtxt
    
    * Uploading Data for 10.1021/acs.accounts.0c00760
    
    * Add files via upload
    
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    
    * Update submission
    
    * Update badges
    
    Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: github-actions <github-actions@github.com>
    
    * Update DOI list (#111)
    
    * bump ord-schema version
    
    * Update README.md
    
    * Update README.md
    
    * Update README.md
    
    * Update README.md
    
    * Update README.md
    
    * Update README.md
    
    * Update with optical rotations
    
    * Fix negative float validations.
    
    * Update dataset description for Electrochem dataset.
    
    Co-authored-by: Connor Coley <connorcoley@users.noreply.github.com>
    Co-authored-by: Jason Wang <jasonwanglmao@gmail.com>
    Co-authored-by: github-actions <github-actions@github.com>
    Co-authored-by: Steven Kearnes <kearnes@google.com>
    Co-authored-by: Michael Maser <46490857+michaelmaser@users.noreply.github.com>
    Co-authored-by: Steven Kearnes <skearnes@relaytx.com>
    Co-authored-by: mwleklin <44303709+mwleklin@users.noreply.github.com>
    8 people authored Jul 28, 2021
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  2. Merge branch 'main' into #98

    brilee authored Jul 28, 2021
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  3. Update submission

    github-actions committed Jul 28, 2021
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  4. Merge branch 'main' into #98

    brilee authored Jul 28, 2021
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  5. Update badges

    github-actions committed Jul 28, 2021
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